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MSEUnet: Refined Intima-media segmentation of the carotid artery based on a multi-scale approach using patch-wise dice loss

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submitted on 2024-11-04, 06:49 and posted on 2024-11-04, 06:49 authored by Najmath Ottakath, Younes Akbari, Somaya Al Maadeed, Mohammad E.H. Chowdhury, Susu Zughaier, Ahmed Bouridane, Kishor Kumar Sadasivuni

Carotid artery stenosis risk stratification is one of the most sought-after methods for diagnosing the chances of stroke. There is an inherent requirement to identify the risk before its onset through techniques such as ultrasound imaging. The carotid artery intima-media thickness, a marker for stenosis, can be identified, marked, and assessed. Typically performed by a trained operator, now automated approaches have been introduced that can automatically segment and classify the status of the carotid artery intima-media, aiding in the diagnosis of the chances of stroke. In this paper, a new framework based on two components is presented to segment the intima-media layer of the carotid artery to aid in diagnosis of the status. Firstly, the segmentation model is based on an enhanced Unet using multi-scale squeeze and excite operations. Secondly, a novel patch-wise dice loss function is introduced to optimize the normal dice loss function. The obtained results using augmentation on two combined datasets indicate an improvement in different metrics with respect to the state of the art. Notably, 89.4% dice coefficient index and 80.85% IoU, with data augmentation. The source code for the functions discussed in this paper will be available at https://github.com/Vlabgit/MSEUnet.git.

Other Information

Published in: Biomedical Signal Processing and Control
License: http://creativecommons.org/licenses/by/4.0/
See article on publisher's website: https://dx.doi.org/10.1016/j.bspc.2024.107077

Funding

Open Access funding provided by the Qatar National Library.

History

Language

  • English

Publisher

Elsevier

Publication Year

  • 2025

License statement

This Item is licensed under the Creative Commons Attribution 4.0 International License.

Institution affiliated with

  • Qatar University
  • Center for Advanced Materials - QU
  • College of Engineering - QU
  • Qatar University Health - QU
  • College of Medicine - QU HEALTH