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Biallelic SCN10A mutations in neuromuscular disease and epileptic encephalopathy

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submitted on 2024-07-15, 04:43 and posted on 2024-07-15, 04:44 authored by Marios Kambouris, Julien Thevenon, Ariane Soldatos, Allison Cox, Joshi Stephen, Tawfeg Ben‐Omran, Yasser Al‐Sarraj, Hala Boulos, William Bone, James C. Mullikin, Alice Masurel‐Paulet, Judith St‐Onge, Yannis Dufford, Corrine Chantegret, Christel Thauvin‐Robinet, Jamil Al‐Alami, Laurence Faivre, Jean Baptiste Riviere, William A. Gahl, Alexander G. Bassuk, May Christine V. Malicdan, Hatem El‐Shanti, NISC Comparative Sequencing Program

Objectives

Two consanguineous families, one of Sudanese ethnicity presenting progressive neuromuscular disease, severe cognitive impairment, muscle weakness, upper motor neuron lesion, anhydrosis, facial dysmorphism, and recurrent seizures and the other of Egyptian ethnicity presenting with neonatal hypotonia, bradycardia, and recurrent seizures, were evaluated for the causative gene mutation.

Methods and Results

Homozygosity mapping and whole exome sequencing (WES) identified damaging homozygous variants in SCN10A, namely c.4514C>T; p.Thr1505Met in the first family and c.4735C>T; p.Arg1579* in the second family. A third family, of Western European descent, included a child with febrile infection-related epilepsy syndrome (FIRES) who also had compound heterozygous missense mutations in SCN10A, namely, c.3482T>C; p.Met1161Thr and c.4709C>A; p.Thr1570Lys. A search for SCN10A variants in three consortia datasets (EuroEPINOMICS, Epi4K/EPGP, Autism/dbGaP) identified an additional five individuals with compound heterozygous variants. A Hispanic male with infantile spasms [c.2842G>C; p.Val948Leu and c.1453C>T; p.Arg485Cys], and a Caucasian female with Lennox–Gastaut syndrome [c.1529C>T; p.Pro510Leu and c.4984G>A; p.Gly1662Ser] in the epilepsy databases and three in the autism databases with [c.4009T>A; p.Ser1337Thr and c.1141A>G; p.Ile381Val], [c.2972C>T; p.Pro991Leu and c.2470C>T; p.His824Tyr], and [c.4009T>A; p.Ser1337Thr and c.2052G>A; p.Met684Ile].

Interpretation

SCN10A is a member of the voltage-gated sodium channel (VGSC) gene family. Sodium channels are responsible for the instigation and proliferation of action potentials in central and peripheral nervous systems. Heterozygous mutations in VGSC genes cause a wide range of epileptic and peripheral nervous system disorders. This report presents autosomal recessive mutations in SCN10A that may be linked to epilepsy-related phenotypes, Lennox–Gastaut syndrome, infantile spasms, and Autism Spectrum Disorder.

Other Information

Published in: Annals of Clinical and Translational Neurology
License: http://creativecommons.org/licenses/by-nc-nd/4.0/
See article on publisher's website: https://dx.doi.org/10.1002/acn3.372

Funding

Qatar National Research Fund (09‐367‐3‐087), Genetic factors in autosomal recessive disorders among consanguineous Qatari families.

Qatar National Research Fund (6‐359‐3‐095), Gene identification in autosomal recessive familial epilepsy.

National Institutes of Health (1R01 NS064159‐01A1, 5R21MH100086‐02).

History

Language

  • English

Publisher

Wiley

Publication Year

  • 2016

License statement

This Item is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.

Institution affiliated with

  • Hamad Bin Khalifa University
  • Qatar Biomedical Research Institute - HBKU
  • Shafallah Medical Genetics Center (2006-2011)
  • Sidra Medicine
  • Sidra Medical and Research Center (2015-2017)
  • Hamad Medical Corporation
  • Weill Cornell Medicine - Qatar
  • Weill Cornell Medical College in Qatar (2001-2015)

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